Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs9393703 | chr6:26356951 | T/C | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9393704 | chr6:26358775 | T/C | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9393705 | chr6:26361011 | G/A | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9393706 | chr6:26361500 | G/A | 3.31E-7 | 213 | 16.47 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9393707 | chr6:26362486 | T/C | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9393708 | chr6:26362643 | C/T | 3.08E-7 | 214 | 9.77 | 13.17 | 16.5 | KM Plot |
| KIRP | rs9393710 | chr6:26367833 | A/G | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9393711 | chr6:26370659 | C/T | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9393712 | chr6:26371000 | G/C | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs9393713 | chr6:26373678 | C/T | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs9393714 | chr6:26373740 | G/T | 3.08E-7 | 214 | 16.45 | 13.6 | 9.77 | KM Plot |
| KIRP | rs9393715 | chr6:26375645 | G/A | 3.08E-7 | 213 | 16.47 | 13.6 | 9.77 | KM Plot |
| KIRP | rs9415125 | chr10:77641999 | C/T | 0 | 214 | 1.2 | 13.52 | 17 | KM Plot |
| KIRP | rs941629 | chr14:52557564 | C/T | 3.26E-9 | 214 | 16.93 | 15.65 | 4.07 | KM Plot |
| KIRP | rs941630 | chr14:52557650 | C/T | 8.54E-6 | 214 | 17.2 | 14.83 | 4.8 | KM Plot |